BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C07LP1|AL426182
(736 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig853 1294 0.0
>3x_Contig853
Length = 2329
Score = 1294 bits (652), Expect = 0.0
Identities = 652/652 (100%)
Strand = Plus / Minus
Query: 1 gatctggtttttcattgttatatgcaatggcctcgaaactgagataaagcacgatcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gatctggtttttcattgttatatgcaatggcctcgaaactgagataaagcacgatcagag 596
Query: 61 attggatccaactcaccagacgaacggcactctggttgacaaggtctgcatgctgctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 attggatccaactcaccagacgaacggcactctggttgacaaggtctgcatgctgctttt 536
Query: 121 ccttagacttacgttggtctttcgtagtctccggatcccaggataacctataagaagcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ccttagacttacgttggtctttcgtagtctccggatcccaggataacctataagaagcta 476
Query: 181 gaggtgggaataagacccgttgagataacaggaatagcgcatgatacccgacggcaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaggtgggaataagacccgttgagataacaggaatagcgcatgatacccgacggcaatgt 416
Query: 241 acaacacagtgtgtaaattggatagaatcacattcgaagtaatccatccattggattcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 acaacacagtgtgtaaattggatagaatcacattcgaagtaatccatccattggattcga 356
Query: 301 gatatgggatcacgtactcggtcaaatgagggtgcggaggtaaggacatcacataggtcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gatatgggatcacgtactcggtcaaatgagggtgcggaggtaaggacatcacataggtcg 296
Query: 361 tgaacagatctatctgttcggaaacagctgctggaacgacgctgctaaacaaagaactac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaacagatctatctgttcggaaacagctgctggaacgacgctgctaaacaaagaactac 236
Query: 421 tcatctttggttattgaacaggcaacaaaactctcaacctcgagggaaacagtaccacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tcatctttggttattgaacaggcaacaaaactctcaacctcgagggaaacagtaccacag 176
Query: 481 ctgctggtctatccgtagtagcacaaagcctttttttctccttctgatctagttccgttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ctgctggtctatccgtagtagcacaaagcctttttttctccttctgatctagttccgttt 116
Query: 541 gaagtggtgaatgtggatttacagtaatttgttccataaagctgctcgagagatgccatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gaagtggtgaatgtggatttacagtaatttgttccataaagctgctcgagagatgccatc 56
Query: 601 ataaaatacgagatgagacaaagatgatatatggtaaagtacgcaagctatg 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 ataaaatacgagatgagacaaagatgatatatggtaaagtacgcaagctatg 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7827
Number of Sequences: 1807
Number of extensions: 7827
Number of successful extensions: 169
Number of sequences better than 1.0e-20: 1
length of query: 736
length of database: 10,358,551
effective HSP length: 16
effective length of query: 720
effective length of database: 10,329,639
effective search space: 7437340080
effective search space used: 7437340080
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)